You absolutely can compare the two programs. Their are differences (IU was able to hire a name coach, IU is in an weaker conference, IU has a bigger name in the basketball world, IU has a MUCH better fan base, IU's problems carried some NCAA sanctions, most of UC's problems were self imposed) but still, the situation the two coaches began with was very, very similar.
Mick had a better first year and a better second year than Crean is having at IU. Those seasons are the ones that are being compared. Just because they didn't happen at the same time doesn't make them not comparable.
Again, the why is different, but the what is the same. We faced NCAA sanctions that our coach asked for immediately (loss of scholarships) and then needed a near perfect APR in order to stop that from happening again. Our recruiting was hurt because it didn't happen for 2.5 years. When our coach was hired, we had one scholarship player (McGowan) and two walk ons (Allen and Miller) with no recruits anywhere on the horizon. And you think they play smart ball because you aren't emotionally attached and realize their limitations, but in the end what does it matter if they are playing at a significantly worse level than UC was in year one and year 2. In fact, UC played at a higher level in year 1 than IU is playing in year 2.
We have gotten better every year under Mick. Even this year, where our record may end up being worse, objective measures such as Pomeroy, Sagarin or the flawed RPI showed a marked improvement. The progress may not be fast enough for some of you, but it is definitely there. The question you have to ask yourself is, how much will be lost if Mick is fired (because it is possible we could lose a lot) and is there a coach we could hire that would make it worth it (given our financial situation and generally worthless fan base, I would strongly argue no).
This team works hard. They are a good defensive team and one of the best rebounding teams in the country. There may be lapses (but that is true for EVERY team), but if you think work ethic is a problem, I have to strongly question your opinion or what the hell you are watching.
Generally our play calling out of timeouts is pretty good.